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Showing 1 - 50 of 70 items for (author: yamaguchi & m)

EMDB-34791:
Doublet microtubule of zebrafish sperm axoneme, WT
Method: subtomogram averaging / : Yamaguchi H, Kikkawa M

EMDB-34792:
Radial spoke 1 of zebrafish sperm axoneme, WT
Method: subtomogram averaging / : Yamaguchi H, Kikkawa M

EMDB-34793:
Radial spoke 2 of zebrafish sperm axoneme, WT
Method: subtomogram averaging / : Yamaguchi H, Kikkawa M

EMDB-34794:
Radial spoke 3 of zebrafish sperm axoneme, WT
Method: subtomogram averaging / : Yamaguchi H, Kikkawa M

EMDB-34795:
Doublet microtubule of zebrafish sperm axoneme, calaxin-/-, OAD+ class
Method: subtomogram averaging / : Yamaguchi H, Kikkawa M

EMDB-34796:
Doublet microtubule of zebrafish sperm axoneme, calaxin-/-, OAD- class
Method: subtomogram averaging / : Yamaguchi H, Kikkawa M

EMDB-34797:
Doublet microtubule of zebrafish sperm axoneme, armc4-/-
Method: subtomogram averaging / : Yamaguchi H, Kikkawa M

EMDB-34798:
Outer arm dynein of zebrafish sperm axoneme, WT
Method: subtomogram averaging / : Yamaguchi H, Kikkawa M

EMDB-34799:
Outer arm dynein of zebrafish sperm axoneme, WT, refined focusing on the docking complex
Method: subtomogram averaging / : Yamaguchi H, Kikkawa M

EMDB-34800:
Outer arm dynein of zebrafish sperm axoneme, WT, 1 mM calcium condition, refined focusing on the docking complex
Method: subtomogram averaging / : Yamaguchi H, Kikkawa M

EMDB-34801:
Outer arm dynein of zebrafish sperm axoneme, calaxin-/-, refined focusing on the docking complex
Method: subtomogram averaging / : Yamaguchi H, Kikkawa M

EMDB-34802:
Outer arm dynein of zebrafish sperm axoneme, calaxin-/-, incubated with recombinant Calaxin protein, refined focusing on the docking complex
Method: subtomogram averaging / : Yamaguchi H, Kikkawa M

EMDB-33200:
Cryo-EM structure of human DNMT1 (aa:351-1616) in complex with ubiquitinated H3 and hemimethylated DNA analog (CXXC-ordered form)
Method: single particle / : Onoda H, Kikuchi A, Kori S, Yoshimi S, Yamagata A, Arita K

EMDB-33201:
Cryo-EM structure of human DNMT1 (aa:351-1616) in complex with ubiquitinated H3 and hemimethylated DNA analog (CXXC-disordered form)
Method: single particle / : Onoda H, Kikuchi A, Kori S, Yoshimi S, Yamagata A, Arita K

EMDB-33298:
Cryo-EM map of apo-DNMT1 (aa:351-1616)
Method: single particle / : Onoda H, Kikuchi A, Kori S, Yoshimi S, Yamagata A, Matsuzawa S, Arita K

EMDB-33299:
Cryo-EM map of DNMT1 (aa:351-1616) in complex with ubiquitinated H3
Method: single particle / : Onoda H, Kikuchi A, Kori S, Yoshimi S, Yamagata A, Arita K

PDB-7xi9:
Cryo-EM structure of human DNMT1 (aa:351-1616) in complex with ubiquitinated H3 and hemimethylated DNA analog (CXXC-ordered form)
Method: single particle / : Onoda H, Kikuchi A, Kori S, Yoshimi S, Yamagata A, Arita K

PDB-7xib:
Cryo-EM structure of human DNMT1 (aa:351-1616) in complex with ubiquitinated H3 and hemimethylated DNA analog (CXXC-disordered form)
Method: single particle / : Onoda H, Kikuchi A, Kori S, Yoshimi S, Yamagata A, Arita K

EMDB-32078:
Cryo-EM structure of the SARS-CoV-2 spike protein (2-up RBD) bound to neutralizing nanobodies P86
Method: single particle / : Maeda R, Fujita J, Konishi Y, Kazuma Y, Yamazaki H, Anzai I, Yamaguchi K, Kasai K, Nagata K, Yamaoka Y, Miyakawa K, Ryo A, Shirakawa K, Makino F, Matsuura Y, Inoue T, Imura A, Namba K, Takaori-Kondo A

EMDB-32079:
Cryo-EM structure of the SARS-CoV-2 spike protein (3-up RBD) bound to neutralizing nanobodies P86
Method: single particle / : Maeda R, Fujita J, Konishi Y, Kazuma Y, Yamazaki H, Anzai I, Yamaguchi K, Kasai K, Nagata K, Yamaoka Y, Miyakawa K, Ryo A, Shirakawa K, Makino F, Matsuura Y, Inoue T, Imura A, Namba K, Takaori-Kondo A

EMDB-32080:
Cryo-EM structure of the SARS-CoV-2 spike protein (1-up RBD) bound to neutralizing nanobodies P17
Method: single particle / : Maeda R, Fujita J, Konishi Y, Kazuma Y, Yamazaki H, Anzai I, Yamaguchi K, Kasai K, Nagata K, Yamaoka Y, Miyakawa K, Ryo A, Shirakawa K, Makino F, Matsuura Y, Inoue T, Imura A, Namba K, Takaori-Kondo A

EMDB-32081:
Cryo-EM structure of the SARS-CoV-2 spike protein (2-up RBD) bound to neutralizing nanobodies P17
Method: single particle / : Maeda R, Fujita J, Konishi Y, Kazuma Y, Yamazaki H, Anzai I, Yamaguchi K, Kasai K, Nagata K, Yamaoka Y, Miyakawa K, Ryo A, Shirakawa K, Makino F, Matsuura Y, Inoue T, Imura A, Namba K, Takaori-Kondo A

PDB-7vq0:
Cryo-EM structure of the SARS-CoV-2 spike protein (2-up RBD) bound to neutralizing nanobodies P86
Method: single particle / : Maeda R, Fujita J, Konishi Y, Kazuma Y, Yamazaki H, Anzai I, Yamaguchi K, Kasai K, Nagata K, Yamaoka Y, Miyakawa K, Ryo A, Shirakawa K, Makino F, Matsuura Y, Inoue T, Imura A, Namba K, Takaori-Kondo A

EMDB-31741:
Structure of the Dicer-2-R2D2 heterodimer
Method: single particle / : Yamaguchi S, Nishizawa T, Kusakizako T, Yamashita K, Tomita A, Hirano H, Nishimasu H, Nureki O

EMDB-31742:
Structure of the Dicer-2-R2D2 heterodimer bound to small RNA duplex
Method: single particle / : Yamaguchi S, Nishizawa T, Kusakizako T, Yamashita K, Tomita A, Hirano H, Nishimasu H, Nureki O

PDB-7v6b:
Structure of the Dicer-2-R2D2 heterodimer
Method: single particle / : Yamaguchi S, Nishizawa T, Kusakizako T, Yamashita K, Tomita A, Hirano H, Nishimasu H, Nureki O

PDB-7v6c:
Structure of the Dicer-2-R2D2 heterodimer bound to small RNA duplex
Method: single particle / : Yamaguchi S, Nishizawa T, Kusakizako T, Yamashita K, Tomita A, Hirano H, Nishimasu H, Nureki O

EMDB-30398:
CryoEM structure of S.typhimurium flagellar LP ring
Method: single particle / : Yamaguchi T, Makino F, Miyata T, Minamino T, Kato T, Namba K

EMDB-30409:
CryoEM structure of S.typhimurium flagellar hook-basal body (HBB) complex
Method: single particle / : Yamaguchi T, Makino F, Miyata T, Minamino T, Kato T, Namba K

PDB-7clr:
CryoEM structure of S.typhimurium flagellar LP ring
Method: single particle / : Yamaguchi T, Makino F, Miyata T, Minamino T, Kato T, Namba K

EMDB-30007:
Cryo-EM structure of phosphoketolase from Bifidobacterium longum
Method: single particle / : Nakata K, Miyazaki N, Yamaguchi H, Hirose M, Miyano H, Mizukoshi T, Kashiwagi T, Iwasaki K

PDB-6lxv:
Cryo-EM structure of phosphoketolase from Bifidobacterium longum
Method: single particle / : Nakata K, Miyazaki N, Yamaguchi H, Hirose M, Miyano H, Mizukoshi T, Kashiwagi T, Iwasaki K

EMDB-0730:
CryoEM map and model of Nitrite Reductase at pH 6.2
Method: single particle / : Adachi N, Yamaguchi T, Moriya T, Kawasaki M, Koiwai K, Shinoda A, Yamada Y, Yumoto F, Kohzuma T, Senda T

EMDB-0731:
CryoEM map and model of Nitrite Reductase at pH 8.1
Method: single particle / : Adachi N, Yamaguchi T, Moriya T, Kawasaki M, Koiwai K, Shinoda A, Yamada Y, Yumoto F, Kohzuma T, Senda T

PDB-6knf:
CryoEM map and model of Nitrite Reductase at pH 6.2
Method: single particle / : Adachi N, Yamaguchi T, Moriya T, Kawasaki M, Koiwai K, Shinoda A, Yamada Y, Yumoto F, Kohzuma T, Senda T

PDB-6kng:
CryoEM map and model of Nitrite Reductase at pH 8.1
Method: single particle / : Adachi N, Yamaguchi T, Moriya T, Kawasaki M, Koiwai K, Shinoda A, Yamada Y, Yumoto F, Kohzuma T, Senda T

EMDB-0980:
CryoEM structure of S.typhimurium R-type straight flagellar filament made of FljB (A461V)
Method: single particle / : Yamaguchi T, Toma S

EMDB-9896:
CryoEM structure of S.typhimurium R-type flagellar filament made of FljB (A461V) without domain D3 by masking out
Method: helical / : Yamaguchi T, Toma S

PDB-6jy0:
CryoEM structure of S.typhimurium R-type straight flagellar filament made of FljB (A461V)
Method: helical / : Yamaguchi T, Toma S, Terahara N, Miyata T, Minamino T, Ashikara M, Namba K, Kato T

EMDB-0809:
Cryo-electron tomography of Candidatus Prometheoarchaeum syntrophicum strain MK-D1
Method: electron tomography / : Imachi H, Nobu MK, Nakahara N, Morono Y, Ogawara M, Takaki Y, Takano Y, Uematsu K, Ikuta T, Ito M, Matsui Y, Miyazaki M, Murata K, Saito Y, Sakai S, Song C, Tasumi E, Yamanaka Y, Yamaguchi T, Kamagata Y, Tamaki H, Takai K

EMDB-0852:
Cryo-electron tomography of Candidatus Prometheoarchaeum syntrophicum strain MK-D1
Method: electron tomography / : Imachi H, Nobu MK, Nakahara N, Morono Y, Ogawara M, Takaki Y, Takano Y, Uematsu K, Ikuta T, Ito M, Matsui Y, Miyazaki M, Murata K, Saito Y, Sakai S, Song C, Tasumi E, Yamanaka Y, Yamaguchi T, Kamagata Y, Tamaki H, Takai K

EMDB-9590:
structure of leucine dehydrogenase from Geobacillus stearothermophilus by cryo-EM
Method: single particle / : Yamaguchi H, Kamegawa A, Nakata K, Kashiwagi T, Mizukoshi T, Fujiyoshi Y, Tani K

EMDB-9592:
Structure of NAD+-bound leucine dehydrogenase from Geobacillus stearothermophilus by cryo-EM
Method: single particle / : Yamaguchi H, Kamegawa A, Nakata K, Kashiwagi T, Mizukoshi T, Fujiyoshi Y, Tani K

PDB-6acf:
structure of leucine dehydrogenase from Geobacillus stearothermophilus by cryo-EM
Method: single particle / : Yamaguchi H, Kamegawa A, Nakata K, Kashiwagi T, Mizukoshi T, Fujiyoshi Y, Tani K

PDB-6ach:
Structure of NAD+-bound leucine dehydrogenase from Geobacillus stearothermophilus by cryo-EM
Method: single particle / : Yamaguchi H, Kamegawa A, Nakata K, Kashiwagi T, Mizukoshi T, Fujiyoshi Y, Tani K

EMDB-6954:
Doublet microtubule of zebrafish sperm axoneme, WT
Method: electron tomography / : Yamaguchi H, Oda T, Kikkawa M, Takeda H

EMDB-6955:
Doublet microtubule of zebrafish sperm axoneme, pih1d1_null mutant
Method: electron tomography / : Yamaguchi H, Oda T, Kikkawa M, Takeda H

EMDB-6956:
Doublet microtubule of zebrafish sperm axoneme, pih1d2_null mutant
Method: electron tomography / : Yamaguchi H, Oda T, Kikkawa M, Takeda H

EMDB-6957:
Doublet microtubule of zebrafish sperm axoneme, ktu_null mutant
Method: electron tomography / : Yamaguchi H, Oda T, Kikkawa M, Takeda H

EMDB-6958:
Doublet microtubule of zebrafish sperm axoneme, twister_null mutant
Method: electron tomography / : Yamaguchi H, Oda T, Kikkawa M, Takeda H

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